The window would stay open for 2 reasons; mechanical, i.e. its stuck, or electrical, i.e. it thinks its shut.
Mechanical: Lubricate the rubber runners of the window with silicone spray or a little vegetable oil. also try to spray lubricate the mechanism by removing the door card for access; this would also allow visibility of the mechanism whilst operating the door.
Electrical: Disconnect the battery and leave for at least 1/2 an hour this will "wipe" any faulty logic that may have occurred. Reconnect the battery and operate the window again, if the problem still exists try the reset procedure you mentioned.
Oldgrubber
August 2019